sitingGZ/german-bert-clinical-ner
Updated
id stringlengths 22 50 | document_id stringlengths 22 50 | passages list | entities list | events list | coreferences list | relations list |
|---|---|---|---|---|---|---|
Arthroskopie.00130003.eng.abstr | Arthroskopie.00130003.eng.abstr | [
{
"id": "Arthroskopie.00130003.eng.abstr-passage-0",
"type": "abstract",
"text": [
"The posterior cruciate ligament ( PCL ) is the strongest ligament of the human knee joint . Its origin is at the lateral wall of the medial femoral condyle and the insertion is located in the posterior part of the ... | [
{
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Arthroskopie.00130011.eng.abstr | Arthroskopie.00130011.eng.abstr | [
{
"id": "Arthroskopie.00130011.eng.abstr-passage-0",
"type": "abstract",
"text": [
"An investigation of 122 knee joints was performed concerning the incidence and morphological characteristics of the meniscofemoral ligaments ( MFL ) Humphry and Wrisberg . Of the knees examined , 96% showed one or ... | [
{
"id": "Arthroskopie.00130011.eng.abstr-s1-t1",
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"id": "Arthroskopie.00130011.eng... | [] | [] | [
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... |
Arthroskopie.00130017.eng.abstr | Arthroskopie.00130017.eng.abstr | [
{
"id": "Arthroskopie.00130017.eng.abstr-passage-0",
"type": "abstract",
"text": [
"This article discusses the surgical treatment of chronic posterior knee instability . The treatment rationale includes osteotomy , posterior cruciate ligament ( PCL ) reconstruction , and posterolateral reconstruct... | [
{
"id": "Arthroskopie.00130017.eng.abstr-s1-t1",
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"id": "Arthroskopie.00130017... | [] | [] | [
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"id": "Arthroskopie.00130017.eng.abstr-s1-r2-t4.1-t1.1",
"type": "location... |
Arthroskopie.00130030.eng.abstr | Arthroskopie.00130030.eng.abstr | [
{
"id": "Arthroskopie.00130030.eng.abstr-passage-0",
"type": "abstract",
"text": [
"The treatment of acute posterior instabilities can involve a reconstructive procedure as well as an antidislocation augmentation . Tibial bony avulsion ruptures must be reconstructed . For the treatment of chronic ... | [
{
"id": "Arthroskopie.00130030.eng.abstr-s1-t1",
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"treatment"
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"db_name": "UMLS",
"db... | [] | [] | [
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"id": "Arthroskopie.00130030.eng.abstr-s1-r1-t1.1-t3.1",
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"id": "Arthroskopie.00130030.eng.abstr-s1-r2-t3.1-t1.1",
"type": "disrupts",
"a... |
Arthroskopie.00130035.eng.abstr | Arthroskopie.00130035.eng.abstr | [
{
"id": "Arthroskopie.00130035.eng.abstr-passage-0",
"type": "abstract",
"text": [
"Since 1989 , 99 people presenting with posterior knee instability were treated by a unique technique . Of these patients , 55 were available for long-term follow-up ( mean 8.2 years ) ; 85% were male , the mean age... | [
{
"id": "Arthroskopie.00130035.eng.abstr-s1-t1",
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"people"
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{
"id": "Arthroskopie.00130035.e... | [] | [] | [
{
"id": "Arthroskopie.00130035.eng.abstr-s1-r1-t2.1-t3.1",
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"id": "Arthroskopie.00130035.eng.abstr-s1-r2-t3.1-t2.1",
"type": "adjacent_t... |
Arthroskopie.00130041.eng.abstr | Arthroskopie.00130041.eng.abstr | [
{
"id": "Arthroskopie.00130041.eng.abstr-passage-0",
"type": "abstract",
"text": [
"In a prospective study , 35 consecutive patients with an isolated posterior knee instability were stabilized arthroscopically in a new all-inside , double bundle technique using the autologous quadrupled semitendin... | [
{
"id": "Arthroskopie.00130041.eng.abstr-s1-t1",
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{
"id": "Arthroskopie.00130041... | [] | [] | [
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"id": "Arthroskopie.00130041.eng.abstr-s1-r1-t4.1-t1.1",
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... |
Arthroskopie.00130047.eng.abstr | Arthroskopie.00130047.eng.abstr | [
{
"id": "Arthroskopie.00130047.eng.abstr-passage-0",
"type": "abstract",
"text": [
"Transplant failure after anterior cruciate ligament plastic surgery is a typical complication . In larger collectives , the amount of revision operations is about 8-12% of the reconstructive anterior cruciate ligam... | [
{
"id": "Arthroskopie.00130047.eng.abstr-s1-t1",
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"text": [
"Transplant"
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0,
10
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"db_name": "UMLS",
"db_id": "C0332835"
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{
"db_name": "UMLS",
"d... | [] | [] | [
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"id": "Arthroskopie.00130047.eng.abstr-s1-r1-t6.1-t5.2",
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"id": "Arthroskopie.00130047.eng.abstr-s1-r2-t1.1-t6.1",
"type": "location_of"... |
Arthroskopie.00130054.eng.abstr | Arthroskopie.00130054.eng.abstr | [
{
"id": "Arthroskopie.00130054.eng.abstr-passage-0",
"type": "abstract",
"text": [
"We examined 223 patients who underwent arthrolysis after ACL reconstruction . An arthrofibrosis group ( n = 156 , 70% ) and a cyclops group ( n = 57 , 30% ) were formed . The mean time interval between arthrolysis ... | [
{
"id": "Arthroskopie.00130054.eng.abstr-s1-t1",
"type": "umlsterm",
"text": [
"patients"
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{
"id": "Arthroskopie.00130054... | [] | [] | [
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"id": "Arthroskopie.00130054.eng.abstr-s4-r1-t7.1-t2.1",
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"id": "Arthroskopie.00130054.eng.abstr-s4-r2-t5.1-t1.1",
"type": "method... |
Arthroskopie.00130060.eng.abstr | Arthroskopie.00130060.eng.abstr | [{"id":"Arthroskopie.00130060.eng.abstr-passage-0","type":"abstract","text":["Magnetic resonance ima(...TRUNCATED) | [{"id":"Arthroskopie.00130060.eng.abstr-s1-t1","type":"umlsterm","text":["Magnetic"],"offsets":[[0,8(...TRUNCATED) | [] | [] | [{"id":"Arthroskopie.00130060.eng.abstr-s1-r1-t8.1-t7.1","type":"result_of","arg1_id":"Arthroskopie.(...TRUNCATED) |
Arthroskopie.00130072.eng.abstr | Arthroskopie.00130072.eng.abstr | [{"id":"Arthroskopie.00130072.eng.abstr-passage-0","type":"abstract","text":["This is a case report (...TRUNCATED) | [{"id":"Arthroskopie.00130072.eng.abstr-s1-t1","type":"umlsterm","text":["glass"],"offsets":[[51,56](...TRUNCATED) | [] | [] | [{"id":"Arthroskopie.00130072.eng.abstr-s1-r1-t2.1-t4.1","type":"adjacent_to","arg1_id":"Arthroskopi(...TRUNCATED) |
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in Data Studio
Dataset Card for MuchMore
The corpus used in the MuchMore project is a parallel corpus of English-German scientific medical abstracts obtained from the Springer Link web site. The corpus consists approximately of 1 million tokens for each language. Abstracts are from 41 medical journals, each of which constitutes a relatively homogeneous medical sub-domain (e.g. Neurology, Radiology, etc.). The corpus of downloaded HTML documents is normalized in various ways, in order to produce a clean, plain text version, consisting of a title, abstract and keywords. Additionally, the corpus was aligned on the sentence level.
Automatic (!) annotation includes: Part-of-Speech; Morphology (inflection and decomposition); Chunks; Semantic Classes (UMLS: Unified Medical Language System, MeSH: Medical Subject Headings, EuroWordNet); Semantic Relations from UMLS.
Citation Information
@inproceedings{buitelaar2003multi,
title={A multi-layered, xml-based approach to the integration of linguistic and semantic annotations},
author={Buitelaar, Paul and Declerck, Thierry and Sacaleanu, Bogdan and Vintar, { {S}}pela and Raileanu, Diana and Crispi, Claudia},
booktitle={Proceedings of EACL 2003 Workshop on Language Technology and the Semantic Web (NLPXML'03), Budapest, Hungary},
year={2003}
}
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Homepage:
muchmore.dfki.de
Pubmed:
True
Public:
True
Tasks:
TRANSL,NER,NED,RE
Size of downloaded dataset files:
155 MB
Size of the auto-converted Parquet files:
98.7 MB
Number of rows:
53,264
Models trained or fine-tuned on bigbio/muchmore